The Pacific Ocean is the main region occurring the interannual and interdecadal variabilities of sea surface temperature. Comparing to the sea surface temperature, the variabilities of ocean heat content in the Pacific Ocean were less studied. Therefore, this paper studied the variabilities of ocean heat content (at depth of 0300 m) in the Pacific Ocean during the period from 1980 to 2020. The Ensemble Empirical Mode Decomposition method (EEMD) was applied to the Institute of Atmospheric Physics (IAP) heat content data to extract the signals at different time scales, and then the Empirical Orthogonal Function (EOF) was applied to analyze the temporal and spatial characteristics of the ocean heat content at different time scales. The results showed that besides the interannual variation, there were also evident interdecadal variations and longterm warming trends of heat content at depth of 0~300 m in the tropical northwest Pacific. In the eastern Pacific and the highlatitude western Pacific, the interdecadal variability of heat content was not prominent. In the tropical northwest Pacific, the heat content was higher during 19801988 and 19992013 than those during 19891998 and 20142020. Our analysis showed that the interdecadal variability was mostly occurred at 5°N—20°N, 120°E—180°E, and at depth of 50200 m in the tropical northwestern Pacific. The interdecadal variation of ocean heat content in the tropical northwestern Pacific played an important role in the interdecadal variation of global sea surface temperature.