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  • The anaerobic oxidation of methane (AOM) is a pivotal component of elemental cycling within cold seep sediments. This process is usually performed by anaerobic methanotrophic archaea (ANME) and sulfate-reducing bacteria (SRB), which usually exist as symbionts. However, pure cultures of ANME have not yet been obtained, and their slow metabolism hinders further exploration and research into their metabolic characteristics and collaborative mechanisms. In this study, we utilized hybridization chain reaction-fluorescence in situ hybridization (HCR-FISH) technology and high-throughput 16S rRNA gene sequencing to investigate the composition and state of ANME communities at different depths of the sediments in the black microbial mat area of the South China Sea Formosa cold seep. The results showed that ANME-1 and ANME-2 were the dominant groups in the sampled Formosa cold seep sediments. Specifically, ANME-2 was found to form consortia with SRB, while no such associations were detected for ANME-1. This observation suggested that ANME-2 and SRB primarily engage in symbiotic AOM processes, highlighting potential differences in physiological roles and methane metabolism pathways between ANME-1 and ANME-2. Furthermore, in sediment samples of all layers, the diameters of ANME-2/SRB consortia were predominantly concentrated between 3-10 μm. Correlation analysis indicated a significant link between the distribution of consortium diameters and environmental factors such as sulfate concentration in the sediment, underscoring the impact of environmental factors on the growth of ANME/SRB consortia. Additionally, using HCR-FISH, we further discovered the presence of multiple consortium clusters in the Formosa cold seep sediment, characterized by orderly connected and uniform-sized consortium, implying possible connections or cooperative relationships among consortia. This study revealed the presence and distribution patterns of ANME groups and sizes of symbiotic microbial consortia in sediment samples from different depths of the Formosa cold seep, laying the foundation for further understanding methane metabolism mechanisms and ecological functions of different ANME groups in situ cold seep sediments.

  • Coastal estuaries are influenced by terrestrial inputs and usually act as sources of atmospheric carbon dioxide (CO2), whereas mangrove ecosystems generally serve as sinks of atmospheric CO2. Therefore, accurately measuring the CO2 emissions at mangrove estuaries is of great significance for constructing regional and global carbon budgets. Dongzhai Harbor locates in the northeastern of Hainan Island, and connects to the Qiongzhou Strait outward, surrounding by 5 major small rivers. Mangroves are mainly distributed in the west and south of Dongzhai Harbor. This study conducted four field surveys in Dongzhaigang, the surrounding major rivers and the adjacent sea areas in December 2022 (dry season), December 2023 (dry season), May 2022 (wet season) and August 2023 (wet season) respectively. The results show that the surface water partial pressure of CO2 (pCO2) presents a decreasing trend from rivers to inner and outer harbor. Temperature, river-sea mixing, and biological respiration jointly affect the spatial distributions of pCO2 in the dry and wet seasons. The CO2 flux in wet season (8.8±8.2 mmol·m-2·d-1) is greater than that in dry season (3.4±3.6 mmol·m-2·d-1), and the annual CO2 flux (6.1±6.3 mmol·m-2·d-1) is lower than that in other tropical mangrove estuaries around the world. This study estimates that the estuarine CO2 emission could offset about 10.4%~21.9% of the carbon sequestration by plants in Dongzhai Harbor.

  • Spatial and temporal characteristic of global internal wave-induced mixing
    HUANG Shuyi, XIE Xiaohui, LI Shaofeng
    2025, 43(1):1-13. DOI:10.3969/j.issn.1001-909X.2025.01.001
    Abstract ( 43 ) HTML ( 7 ) PDF ( 23836KB ) ( 40 )   
  • Calibration of salinity data of a domestically-produced HM4000 deep profiling float
    ZHANG Xuan, LIU Zenghong, CHEN Zhaohui, REN Chong, XIONG Haixia, GAO Zhiyuan, YAN Xiaoluan, ZHANG Linlin
    2025, 43(1):14-21. DOI:10.3969/j.issn.1001-909X.2025.01.002
    Abstract ( 52 ) HTML ( 12 ) PDF ( 9789KB ) ( 20 )   
  • Utilizing HCR-FISH to investigate the status of anaerobic methanotrophic archaea in cold seep sediments
    HE Maoyu, WANG Jing, LI Sihan, LIANG Lewen
    2025, 43(1):22-33. DOI:10.3969/j.issn.1001-909X.2025.01.003
    Abstract ( 85 ) HTML ( 9 ) PDF ( 13111KB ) ( 19 )   
  • Microbial community structure and function in deep-sea polymetallic nodules and surrounding sediments
    HE Xinyi, LIU Qian, LI Xiaohu, LI Zhenggang, WANG Hao, ZHU Zhimin, LI Huaiming
    2025, 43(1):34-46. DOI:10.3969/j.issn.1001-909X.2025.01.004
    Abstract ( 69 ) HTML ( 4 ) PDF ( 20261KB ) ( 14 )   
  • The fluid migration system and gas hydrate enrichment and accumulation in southern South China Sea
    WANG Xiuping, YANG Pengcheng, LIU Fangyuan
    2025, 43(1):47-56. DOI:10.3969/j.issn.1001-909X.2025.01.005
    Abstract ( 26 ) HTML ( 4 ) PDF ( 28098KB ) ( 8 )   
  • Evaluation of ecological restoration effect in the surrounding sea area of artificial island based on Bayesian network
    HOU Zonghao, ZHANG Yifei, FANG Xin, DUAN Yixin
    2025, 43(1):57-68. DOI:10.3969/j.issn.1001-909X.2025.01.006
    Abstract ( 19 ) HTML ( 5 ) PDF ( 11511KB ) ( 9 )   
  • Analysis of the variation characteristics of the sea level in Zhoushan and the adjacent East China Sea from 1993 to 2021
    JIN Jie, CHEN Yujie, YAO Yongheng, ZHANG Siyuan, HU Zhentao, DING Mengrong, JIA Bin
    2025, 43(1):69-78. DOI:10.3969/j.issn.1001-909X.2025.01.007
    Abstract ( 37 ) HTML ( 2 ) PDF ( 17223KB ) ( 21 )   
  • Seasonal variation and controlling factors of air-sea CO2 flux in tropical mangrove estuary: A case study of Dongzhai Harbor, Hainan
    WANG Yang, QUAN Xin, ZHUANG Ya, ZHAO Huade, SU Jianzhong
    2025, 43(1):79-89. DOI:10.3969/j.issn.1001-909X.2025.01.008
    Abstract ( 65 ) HTML ( 9 ) PDF ( 14800KB ) ( 21 )   
  • Variation characteristics and regulation mechanism of pCO2 in typical subtropical coral reefs area in spring
    YANG Bo, ZHANG Zhuo, ZHOU Jin, LIN Ziyi, XIE Ziqiang, ZHENG Huina, LIAO Baolin, XIAO Baohua
    2025, 43(1):90-106. DOI:10.3969/j.issn.1001-909X.2025.01.009
    Abstract ( 119 ) HTML ( 2 ) PDF ( 17014KB ) ( 9 )   
  • Numerical simulation of the influence of submerged artificial structures on hydrodynamic characteristics and run-up of solitary waves over shore reefs
    ZHU Lunjia, QU Ke, WANG Xu, WANG Chao, LI Tiankuo
    2025, 43(1):107-121. DOI:10.3969/j.issn.1001-909X.2025.01.010
    Abstract ( 19 ) HTML ( 2 ) PDF ( 9587KB ) ( 9 )   
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